BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037F04SP1|AL430414
(870 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1799 1725 0.0
>3x_Contig1799
Length = 39855
Score = 1725 bits (870), Expect = 0.0
Identities = 870/870 (100%)
Strand = Plus / Plus
Query: 1 gatcttcggcttcagcatcagcaccactgtccataaacaacgaatcggaatgtgtaactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13751 gatcttcggcttcagcatcagcaccactgtccataaacaacgaatcggaatgtgtaactt 13810
Query: 61 caaagctattatgtccattgtttgtattattgtttgtagagtaggactccttgttgagta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13811 caaagctattatgtccattgtttgtattattgtttgtagagtaggactccttgttgagta 13870
Query: 121 agtagggattaatatactgttcttcggaatgactcagatcaatttggttcaaaaactcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13871 agtagggattaatatactgttcttcggaatgactcagatcaatttggttcaaaaactcct 13930
Query: 181 gtatagagttcgaatttaacgagttaccaacggtagagtttttcctggagcttatatcgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13931 gtatagagttcgaatttaacgagttaccaacggtagagtttttcctggagcttatatcgg 13990
Query: 241 ccacctgcggcgacagggtaccgacagacattactgagggttctatattgggagaatagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13991 ccacctgcggcgacagggtaccgacagacattactgagggttctatattgggagaatagt 14050
Query: 301 tcagtgtattgttccttgagctatgattagaaatcttttgagaattagggtagctatcga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14051 tcagtgtattgttccttgagctatgattagaaatcttttgagaattagggtagctatcga 14110
Query: 361 cgggactcccactaagagctattccgttactattcccgctcaattcagaccccgtatggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14111 cgggactcccactaagagctattccgttactattcccgctcaattcagaccccgtatggt 14170
Query: 421 attccgtcgatttctgccggtcctcaaaccccagccgtggttctgccgactgaacaacct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14171 attccgtcgatttctgccggtcctcaaaccccagccgtggttctgccgactgaacaacct 14230
Query: 481 cggaatacgttgttttatcatctagcattgccaagaagtcattcaattctgtcggcgtac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14231 cggaatacgttgttttatcatctagcattgccaagaagtcattcaattctgtcggcgtac 14290
Query: 541 ttcccatgttgttttgcagcgtttccctcttaacattcctaacagcaggcggtgtgctgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14291 ttcccatgttgttttgcagcgtttccctcttaacattcctaacagcaggcggtgtgctgc 14350
Query: 601 ccgtactttcgttcctccgtgtatagccaagtgttggctcagttgcaactttatcaccgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14351 ccgtactttcgttcctccgtgtatagccaagtgttggctcagttgcaactttatcaccgt 14410
Query: 661 aatttgtcgataccgaatcgtttcttatatctaatgaattctctgaagtataagagcctc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14411 aatttgtcgataccgaatcgtttcttatatctaatgaattctctgaagtataagagcctc 14470
Query: 721 ggtttccagactcataccgacccagagccattttttttcctccggacagtacgtttgttt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14471 ggtttccagactcataccgacccagagccattttttttcctccggacagtacgtttgttt 14530
Query: 781 atttagtatcgtaattatcacaatgataccaagctaattgataagtaaatccgtcttcct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14531 atttagtatcgtaattatcacaatgataccaagctaattgataagtaaatccgtcttcct 14590
Query: 841 ctaccctttatttgcctttgcaaaatgggt 870
||||||||||||||||||||||||||||||
Sbjct: 14591 ctaccctttatttgcctttgcaaaatgggt 14620
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5352
Number of Sequences: 1807
Number of extensions: 5352
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 870
length of database: 10,358,551
effective HSP length: 16
effective length of query: 854
effective length of database: 10,329,639
effective search space: 8821511706
effective search space used: 8821511706
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)